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IID00054
UniprotP52701
ProteinDNA mismatch repair protein Msh6
GeneMSH6
OrganismHomo sapiens
Sequence LLPS PhaSepDB
PhaSePro
LLPSDB
DrLLPS
Network xml rdf
Structure
Experiment
  :order   disorder   conflict   PDB cluster   ProS   Pfam Domain   SEG
1360
 order/disorder by at least rule
     disorder by at least rule
     order by at least rule
 order/disorder by majority rule
Seq 68-201 Monomer :
 Evidence NMR 2gfu A Reference
       Region 2gfu A 68-201 order
       Region 2gfu A 68-86 high_rmsd
       Region 2gfu A 197-201 high_rmsd
Seq 341-1360 Hetero dimer : IID00048Complex
 Evidence X-RAY 2o8f B Reference
       Region 2o8f B 341-361 disorder
       Region 2o8f B 362-550 order
       Region 2o8f B 551-551 disorder
       Region 2o8f B 552-651 order
       Region 2o8f B 652-652 disorder
       Region 2o8f B 653-718 order
       Region 2o8f B 719-727 disorder
       Region 2o8f B 728-933 order
       Region 2o8f B 934-934 disorder
       Region 2o8f B 935-991 order
       Region 2o8f B 992-992 disorder
       Region 2o8f B 993-1100 order
       Region 2o8f B 1101-1105 disorder
       Region 2o8f B 1106-1124 order
       Region 2o8f B 1125-1125 disorder
       Region 2o8f B 1126-1178 order
       Region 2o8f B 1179-1187 disorder
       Region 2o8f B 1188-1270 order
       Region 2o8f B 1271-1283 disorder
       Region 2o8f B 1284-1335 order
       Region 2o8f B 1336-1360 disorder
 Evidence X-RAY 2o8e B Reference
       Region 2o8e B 341-361 disorder
       Region 2o8e B 362-550 order
       Region 2o8e B 551-551 disorder
       Region 2o8e B 552-651 order
       Region 2o8e B 652-652 disorder
       Region 2o8e B 653-718 order
       Region 2o8e B 719-727 disorder
       Region 2o8e B 728-933 order
       Region 2o8e B 934-934 disorder
       Region 2o8e B 935-991 order
       Region 2o8e B 992-992 disorder
       Region 2o8e B 993-1100 order
       Region 2o8e B 1101-1103 disorder
       Region 2o8e B 1104-1123 order
       Region 2o8e B 1124-1124 disorder
       Region 2o8e B 1125-1178 order
       Region 2o8e B 1179-1187 disorder
       Region 2o8e B 1188-1270 order
       Region 2o8e B 1271-1283 disorder
       Region 2o8e B 1284-1335 order
       Region 2o8e B 1336-1360 disorder
 Evidence X-RAY 2o8d B Reference
       Region 2o8d B 341-361 disorder
       Region 2o8d B 362-550 order
       Region 2o8d B 551-551 disorder
       Region 2o8d B 552-651 order
       Region 2o8d B 652-652 disorder
       Region 2o8d B 653-718 order
       Region 2o8d B 719-727 disorder
       Region 2o8d B 728-933 order
       Region 2o8d B 934-934 disorder
       Region 2o8d B 935-991 order
       Region 2o8d B 992-992 disorder
       Region 2o8d B 993-1098 order
       Region 2o8d B 1099-1104 disorder
       Region 2o8d B 1105-1124 order
       Region 2o8d B 1125-1125 disorder
       Region 2o8d B 1126-1178 order
       Region 2o8d B 1179-1187 disorder
       Region 2o8d B 1188-1270 order
       Region 2o8d B 1271-1283 disorder
       Region 2o8d B 1284-1335 order
       Region 2o8d B 1336-1360 disorder
 Evidence X-RAY 2o8c B Reference
       Region 2o8c B 341-361 disorder
       Region 2o8c B 362-550 order
       Region 2o8c B 551-551 disorder
       Region 2o8c B 552-651 order
       Region 2o8c B 652-652 disorder
       Region 2o8c B 653-718 order
       Region 2o8c B 719-727 disorder
       Region 2o8c B 728-933 order
       Region 2o8c B 934-934 disorder
       Region 2o8c B 935-991 order
       Region 2o8c B 992-992 disorder
       Region 2o8c B 993-1098 order
       Region 2o8c B 1099-1104 disorder
       Region 2o8c B 1105-1124 order
       Region 2o8c B 1125-1125 disorder
       Region 2o8c B 1126-1178 order
       Region 2o8c B 1179-1187 disorder
       Region 2o8c B 1188-1270 order
       Region 2o8c B 1271-1283 disorder
       Region 2o8c B 1284-1335 order
       Region 2o8c B 1336-1360 disorder
 Evidence X-RAY 2o8b B Reference
       Region 2o8b B 341-361 disorder
       Region 2o8b B 362-550 order
       Region 2o8b B 551-551 disorder
       Region 2o8b B 552-651 order
       Region 2o8b B 652-652 disorder
       Region 2o8b B 653-718 order
       Region 2o8b B 719-727 disorder
       Region 2o8b B 728-933 order
       Region 2o8b B 934-934 disorder
       Region 2o8b B 935-991 order
       Region 2o8b B 992-992 disorder
       Region 2o8b B 993-1098 order
       Region 2o8b B 1099-1104 disorder
       Region 2o8b B 1105-1122 order
       Region 2o8b B 1123-1125 disorder
       Region 2o8b B 1126-1178 order
       Region 2o8b B 1179-1187 disorder
       Region 2o8b B 1188-1270 order
       Region 2o8b B 1271-1283 disorder
       Region 2o8b B 1284-1335 order
       Region 2o8b B 1336-1360 disorder
Seqphosphorylation
    14-14 Phosphoserine
    41-41 Phosphoserine
    43-43 Phosphoserine
    79-79 Phosphoserine
    91-91 Phosphoserine
    137-137 Phosphoserine
    200-200 Phosphoserine
    219-219 Phosphoserine
    227-227 Phosphoserine
    252-252 Phosphoserine
    254-254 Phosphoserine
    256-256 Phosphoserine
    261-261 Phosphoserine
    269-269 Phosphothreonine
    274-274 Phosphoserine
    275-275 Phosphoserine
    279-279 Phosphoserine
    280-280 Phosphoserine
    309-309 Phosphoserine
    488-488 Phosphothreonine
    830-830 Phosphoserine
    935-935 Phosphoserine
    1010-1010 Phosphothreonine
Seqacetylation
    70-70 N6-acetyllysine
    504-504 N6-acetyllysine
 
Prediction
NeProc
Disorder 1-87,152-367
Order 88-151,368-499,505-526,532-664,674-714,726-1120,1126-1360
ProS 4-13,362-367
AlphaFold
Disorder 1-88,123-126,137-138,194-362,549-551,715-729,749-751,932-933,987-989,1100-1106,1118-1125,1179-1185,1271-1283,1295-1297,1338-1350,1352-1353,1356-1356,1359-1360
Order 89-122,127-136,139-193,363-548,552-714,730-748,752-931,934-986,990-1099,1107-1117,1126-1178,1186-1270,1284-1294,1298-1337,1351-1351,1354-1355,1357-1358
Pfam Hmmer
PF00855 89-162 7.1e-36
PF01624 407-526 1.6e-51
PF05188 537-704 5e-12
PF05190 932-1024 5.2e-23
PF00488 1074-1326 2e-106
SEG 23-51 ,198-209 ,220-230 ,238-264 ,374-390 ,810-822
Function
Function in SwissProt
Component of the post-replicative DNA mismatch repair system (MMR). Heterodimerizes with MSH2 to form MutS alpha, which binds to DNA mismatches thereby initiating DNA repair. When bound, MutS alpha bends the DNA helix and shields approximately 20 base pairs, and recognizes single base mismatches and dinucleotide insertion-deletion loops (IDL) in the DNA. After mismatch binding, forms a ternary complex with the MutL alpha heterodimer, which is thought to be responsible for directing the downstream MMR events, including strand discrimination, excision, and resynthesis. ATP binding and hydrolysis play a pivotal role in mismatch repair functions. The ATPase activity associated with MutS alpha regulates binding similar to a molecular switch: mismatched DNA provokes ADP-->ATP exchange, resulting in a discernible conformational transition that converts MutS alpha into a sliding clamp capable of hydrolysis-independent diffusion along the DNA backbone. This transition is crucial for mismatch repair. MutS alpha may also play a role in DNA homologous recombination repair. Recruited on chromatin in G1 and early S phase via its PWWP domain that specifically binds trimethylated 'Lys-36' of histone H3 (H3K36me3): early recruitment to chromatin to be replicated allowing a quick identification of mismatch repair to initiate the DNA mismatch repair reaction.
Biological Process
See also
Diagram with PDB data
MSH2/MSH6/DNAhuman MutSalpha (MSH2/MSH6) bound to ADP and a G T mispair