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IID00770
UniprotP06239
ProteinTyrosine-protein kinase Lck
GeneLCK
OrganismHomo sapiens
Sequence LLPS PhaSepDB
PhaSePro
LLPSDB
DrLLPS
Network xml rdf
Structure
Experiment
  :order   disorder   conflict   PDB cluster   ProS   Pfam Domain   SEG
509
 order/disorder by at least rule
     disorder by at least rule
     order by at least rule
 order/disorder by majority rule
Seq 2-11 Hetero hexamer : Q13432
 Evidence X-RAY 6h6a K Reference
       Region 6h6a K 2-5 order
       Region 6h6a K 6-11 disorder
 Evidence X-RAY 6h6a H Reference
       Region 6h6a H 2-5 order
       Region 6h6a H 6-11 disorder
 Evidence X-RAY 6h6a E Reference
       Region 6h6a E 2-7 order
       Region 6h6a E 8-11 disorder
Seq 7-35 Hetero dimer : P01730
 Evidence NMR 1q68 B Reference
       Region 1q68 B 7-35 order
       Region 1q68 B 7-7 high_rmsd
       Region 1q68 B 31-35 high_rmsd
Seq 7-35 Hetero dimer : P01732
 Evidence NMR 1q69 B Reference
       Region 1q69 B 7-35 order
       Region 1q69 B 7-16 high_rmsd
       Region 1q69 B 33-35 high_rmsd
Seqdisorder 7-35
 Evidence NMR Reference
       Region 7-35 disorder
Seq 53-226 Monomer :
 Evidence X-RAY 4d8k A Reference
       Region 4d8k A 53-63 disorder
       Region 4d8k A 64-226 order
Seq 53-226,502-509 Hetero dimer :
 Evidence X-RAY 1lck B Reference
       Region 1lck B 502-509 order
 Evidence X-RAY 1lck A Reference
       Region 1lck A 53-62 disorder
       Region 1lck A 63-226 order
Seq 59-119 Homo dimer :
 Evidence X-RAY 2iim A Reference
       Region 2iim A 59-119 order
Seq 59-120 Monomer :
 Evidence NMR 1kik A Reference
       Region 1kik A 64-120 order
 Evidence NMR 1h92 A Reference
       Region 1h92 A 59-120 order
       Region 1h92 A 59-62 high_rmsd
Seq 64-226 Hetero dodecamer : Q63767
 Evidence X-RAY 1x27 F Reference
       Region 1x27 F 64-226 order
 Evidence X-RAY 1x27 E Reference
       Region 1x27 E 64-226 order
 Evidence X-RAY 1x27 D Reference
       Region 1x27 D 64-226 order
 Evidence X-RAY 1x27 C Reference
       Region 1x27 C 64-226 order
 Evidence X-RAY 1x27 B Reference
       Region 1x27 B 64-226 order
 Evidence X-RAY 1x27 A Reference
       Region 1x27 A 64-226 order
Seq 118-231 Hetero dimer :
 Evidence X-RAY 5mtm A Reference
       Region 5mtm A 118-118 disorder
       Region 5mtm A 119-226 order
       Region 5mtm A 227-231 disorder
Seq 118-231 Hetero dimer :
 Evidence X-RAY 5mtn A Reference
       Region 5mtn A 118-120 disorder
       Region 5mtn A 121-172 order
       Region 5mtn A 173-174 disorder
       Region 5mtn A 175-210 order
       Region 5mtn A 211-231 disorder
Seq 119-226 Monomer :
 Evidence X-RAY 1bhf A Reference
       Region 1bhf A 119-121 disorder
       Region 1bhf A 122-226 order
 Evidence X-RAY 1fbz A Reference
       Region 1fbz A 123-226 order
 Evidence X-RAY 1fbz B Reference
       Region 1fbz B 123-226 order
 Evidence X-RAY 1ijr A Reference
       Region 1ijr A 124-226 order
 Evidence X-RAY 1lkk A Reference
       Region 1lkk A 122-226 order
 Evidence X-RAY 1lkl A Reference
       Region 1lkl A 123-226 order
Seq 119-226 Homo dimer :
 Evidence X-RAY 1bhh A Reference
       Region 1bhh A 119-122 disorder
       Region 1bhh A 123-226 order
 Evidence X-RAY 1bhh B Reference
       Region 1bhh B 124-226 order
 Evidence X-RAY 1cwe A Reference
       Region 1cwe A 127-222 order
 Evidence X-RAY 1cwe C Reference
       Region 1cwe C 127-222 order
 Evidence X-RAY 8x2p A Reference
       Region 8x2p A 119-124 disorder
       Region 8x2p A 125-170 order
       Region 8x2p A 171-174 disorder
       Region 8x2p A 175-226 order
 Evidence X-RAY 8x2p B Reference
       Region 8x2p B 119-226 order
Seq 119-226 Hetero dimer : P03079
 Evidence X-RAY 1lcj A Reference
       Region 1lcj A 119-122 disorder
       Region 1lcj A 123-226 order
Seq 127-222 Hetero dimer :
 Evidence X-RAY 1cwd L Reference
       Region 1cwd L 127-222 order
Seq 225-509 Monomer :
 Evidence X-RAY 3ac1 A Reference
       Region 3ac1 A 225-230 disorder
       Region 3ac1 A 231-501 order
       Region 3ac1 A 502-509 disorder
 Evidence X-RAY 3ac2 A Reference
       Region 3ac2 A 225-230 disorder
       Region 3ac2 A 231-501 order
       Region 3ac2 A 502-509 disorder
 Evidence X-RAY 3ac3 A Reference
       Region 3ac3 A 225-230 disorder
       Region 3ac3 A 231-501 order
       Region 3ac3 A 502-509 disorder
 Evidence X-RAY 3ac4 A Reference
       Region 3ac4 A 225-230 disorder
       Region 3ac4 A 231-501 order
       Region 3ac4 A 502-509 disorder
 Evidence X-RAY 3ac5 A Reference
       Region 3ac5 A 225-230 disorder
       Region 3ac5 A 231-501 order
       Region 3ac5 A 502-509 disorder
 Evidence X-RAY 3ac8 A Reference
       Region 3ac8 A 225-230 disorder
       Region 3ac8 A 231-501 order
       Region 3ac8 A 502-509 disorder
 Evidence X-RAY 3acj A Reference
       Region 3acj A 225-230 disorder
       Region 3acj A 231-501 order
       Region 3acj A 502-509 disorder
 Evidence X-RAY 3ack A Reference
       Region 3ack A 225-230 disorder
       Region 3ack A 231-501 order
       Region 3ack A 502-509 disorder
 Evidence X-RAY 3ad4 A Reference
       Region 3ad4 A 225-230 disorder
       Region 3ad4 A 231-501 order
       Region 3ad4 A 502-509 disorder
 Evidence X-RAY 3ad5 A Reference
       Region 3ad5 A 225-230 disorder
       Region 3ad5 A 231-501 order
       Region 3ad5 A 502-509 disorder
 Evidence X-RAY 3ad6 A Reference
       Region 3ad6 A 225-229 disorder
       Region 3ad6 A 230-502 order
       Region 3ad6 A 503-509 disorder
 Evidence X-RAY 3b2w A Reference
       Region 3b2w A 226-237 disorder
       Region 3b2w A 238-396 order
       Region 3b2w A 397-398 disorder
       Region 3b2w A 399-500 order
       Region 3b2w A 501-502 disorder
 Evidence X-RAY 3bym A Reference
       Region 3bym A 230-501 order
 Evidence X-RAY 3byo A Reference
       Region 3byo A 231-501 order
 Evidence X-RAY 3bys A Reference
       Region 3bys A 225-229 disorder
       Region 3bys A 230-385 order
       Region 3bys A 386-402 disorder
       Region 3bys A 403-501 order
 Evidence X-RAY 3byu A Reference
       Region 3byu A 225-230 disorder
       Region 3byu A 231-385 order
       Region 3byu A 386-400 disorder
       Region 3byu A 401-501 order
 Evidence X-RAY 4c3f A Reference
       Region 4c3f A 237-237 disorder
       Region 4c3f A 238-397 order
       Region 4c3f A 398-401 disorder
       Region 4c3f A 402-498 order
       Region 4c3f A 499-501 disorder
 Evidence X-RAY 3kmm A Reference
       Region 3kmm A 229-230 disorder
       Region 3kmm A 231-501 order
       Region 3kmm A 502-509 disorder
 Evidence X-RAY 3kxz A Reference
       Region 3kxz A 225-237 disorder
       Region 3kxz A 238-501 order
       Region 3kxz A 502-509 disorder
 Evidence X-RAY 3lck A Reference
       Region 3lck A 231-501 order
 Evidence X-RAY 3mpm A Reference
       Region 3mpm A 237-237 disorder
       Region 3mpm A 238-397 order
       Region 3mpm A 398-401 disorder
       Region 3mpm A 402-498 order
       Region 3mpm A 499-501 disorder
 Evidence X-RAY 2of2 A Reference
       Region 2of2 A 231-501 order
 Evidence X-RAY 2of4 A Reference
       Region 2of4 A 231-501 order
 Evidence X-RAY 2ofu A Reference
       Region 2ofu A 229-501 order
 Evidence X-RAY 2og8 A Reference
       Region 2og8 A 237-385 order
       Region 2og8 A 386-402 disorder
       Region 2og8 A 403-499 order
 Evidence X-RAY 2og8 B Reference
       Region 2og8 B 237-386 order
       Region 2og8 B 387-402 disorder
       Region 2og8 B 403-499 order
 Evidence X-RAY 2pl0 A Reference
       Region 2pl0 A 225-230 disorder
       Region 2pl0 A 231-498 order
       Region 2pl0 A 499-509 disorder
 Evidence X-RAY 1qpc A Reference
       Region 1qpc A 231-501 order
       Region 1qpc A 502-509 disorder
 Evidence X-RAY 1qpd A Reference
       Region 1qpd A 231-501 order
       Region 1qpd A 502-509 disorder
 Evidence X-RAY 1qpe A Reference
       Region 1qpe A 231-501 order
       Region 1qpe A 502-509 disorder
 Evidence X-RAY 1qpj A Reference
       Region 1qpj A 231-235 disorder
       Region 1qpj A 236-501 order
       Region 1qpj A 502-509 disorder
 Evidence X-RAY 2zm1 A Reference
       Region 2zm1 A 225-230 disorder
       Region 2zm1 A 231-501 order
       Region 2zm1 A 502-509 disorder
 Evidence X-RAY 2zm4 A Reference
       Region 2zm4 A 225-230 disorder
       Region 2zm4 A 231-501 order
       Region 2zm4 A 502-509 disorder
 Evidence X-RAY 2zyb A Reference
       Region 2zyb A 225-230 disorder
       Region 2zyb A 231-501 order
       Region 2zyb A 502-509 disorder
 Evidence X-RAY 6pdj A Reference
       Region 6pdj A 225-225 order
       Region 6pdj A 226-230 disorder
       Region 6pdj A 231-500 order
       Region 6pdj A 501-509 disorder
Seq 232-498 Homo dimer :
 Evidence X-RAY 2ofv B Reference
       Region 2ofv B 232-278 order
       Region 2ofv B 279-283 disorder
       Region 2ofv B 284-391 order
       Region 2ofv B 392-402 disorder
       Region 2ofv B 403-442 order
       Region 2ofv B 443-449 disorder
       Region 2ofv B 450-454 order
       Region 2ofv B 455-455 disorder
       Region 2ofv B 456-498 order
 Evidence X-RAY 2ofv A Reference
       Region 2ofv A 232-278 order
       Region 2ofv A 279-285 disorder
       Region 2ofv A 286-386 order
       Region 2ofv A 387-403 disorder
       Region 2ofv A 404-498 order
Seq 391-397 Hetero dimer : Q9Y2R2
 Evidence X-RAY 3brh C Reference
       Region 3brh C 391-397 order
 Evidence X-RAY 3brh D Reference
       Region 3brh D 391-394 order
       Region 3brh D 395-397 disorder
Seqdisorder 225-230,502-509
 Evidence X-RAY Reference
       Region 225-230 disorder
       Region 502-509 disorder
SeqProS predicted 2-7 This region is predicted to be disordered by AlphaFold (pLDDT <68.5) and NeProc. Hetero hexamer : Q13432
       Region 6h6a E 2-7 order
       Region 6h6a H 2-5 order
       Region 6h6a K 2-5 order
SeqProS verified 8-30 The residues with high_rmsd are excluded from the ProS. Hetero dimer : P01730
       Region 1q68 B 7-35 order
       Region 7-35 disorder
SeqProS verified 17-32 The residues with high_rmsd are excluded from the ProS. Hetero dimer : P01732
       Region 1q69 B 7-35 order
       Region 7-35 disorder
SeqProS verified 502-509 Phosphorylation of the inhibitory tyrosine (Y505) results in a close/inactive conformation (PubMed=7512222). Hetero dimer :
       Region 1lck B 502-509 order
       Region 502-509 disorder
Seqphosphorylation
    194-194 Phosphoserine
    505-505 Phosphotyrosine; by CSK
    394-394 Phosphotyrosine; by autocatalysis
    162-162 Phosphoserine
    192-192 Phosphotyrosine
    159-159 Phosphothreonine
    102-102 Phosphoserine
 
Prediction
NeProc
Disorder 1-60,502-509
Order 61-501
ProS 1-31,39-43,502-509
AlphaFold
Disorder 1-18,21-22,24-63,255-255,279-279,384-401,499-504,508-509
Order 19-20,23-23,64-254,256-278,280-383,402-498,505-507
Pfam Hmmer
PF00018 64-119 9.8e-20
PF00017 127-209 2.5e-44
PF07714 245-494 8.2e-155
Function
Function in SwissProt
Non-receptor tyrosine-protein kinase that plays an essential role in the selection and maturation of developing T-cells in the thymus and in the function of mature T-cells. Plays a key role in T-cell antigen receptor (TCR)-linked signal transduction pathways. Constitutively associated with the cytoplasmic portions of the CD4 and CD8 surface receptors. Association of the TCR with a peptide antigen-bound MHC complex facilitates the interaction of CD4 and CD8 with MHC class II and class I molecules, respectively, thereby recruiting the associated LCK protein to the vicinity of the TCR/CD3 complex. LCK then phosphorylates tyrosine residues within the immunoreceptor tyrosine-based activation motifs (ITAM) of the cytoplasmic tails of the TCR-gamma chains and CD3 subunits, initiating the TCR/CD3 signaling pathway. Once stimulated, the TCR recruits the tyrosine kinase ZAP70, that becomes phosphorylated and activated by LCK. Following this, a large number of signaling molecules are recruited, ultimately leading to lymphokine production. LCK also contributes to signaling by other receptor molecules. Associates directly with the cytoplasmic tail of CD2, which leads to hyperphosphorylation and activation of LCK. Also plays a role in the IL2 receptor-linked signaling pathway that controls the T-cell proliferative response. Binding of IL2 to its receptor results in increased activity of LCK. Is expressed at all stages of thymocyte development and is required for the regulation of maturation events that are governed by both pre-TCR and mature alpha beta TCR. Phosphorylates other substrates including RUNX3, PTK2B/PYK2, the microtubule-associated protein MAPT, RHOH or TYROBP. Interacts with FYB2 (PubMed:27335501).
Biological Process
Diagram with PDB data
LCKSH3-SH2 DOMAIN FRAGMENT OF HUMAN P56-LCK TYROSINE KINASE COMPLEXED WITH THE 10 RESIDUE SYNTHETIC PHOSPHOTYROSYL PEPTIDE TEGQPYQPQPA
LCK/CD4/Zn2+Solution structure of T-cell surface glycoprotein CD4 and Proto-oncogene tyrosine-protein kinase LCK fragments
LCK/CD8A/Zn2+Solution structure of T-cell surface glycoprotein CD8 alpha chain and Proto-oncogene tyrosine-protein kinase LCK fragments