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IID50171  Nuclear polyadenylated RNA-binding protein NAB2 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c)) P32505
  :order  :disorder  :conflict  :PDB cluster  :ProS  :SCOP Domain  :Pfam Domain
Networkxml
Experiment
525
fasta
 order/disorder by at least rule
     disorder by at least rule
     order by at least rule
 order/disorder by majority rule
Seq 1-105 Monomer :
 Evidence X-RAY 2v75 A Reference
       Region 2v75 A 1-5 disorder
       Region 2v75 A 6-94 order
       Region 2v75 A 95-104 disorder
 Evidence NMR 2jps A Reference
       Region 2jps A 1-105 order
       Region 2jps A 1-1 high_rmsd
       Region 2jps A 101-105 high_rmsd
Seq 1-105 Hetero dimer : IID50178Complex
 Evidence X-RAY 3lcn A Reference
       Region 3lcn A 1-4 disorder
       Region 3lcn A 5-100 order
       Region 3lcn A 101-105 disorder
 Evidence X-RAY 3lcn B Reference
       Region 3lcn B 1-3 disorder
       Region 3lcn B 4-100 order
       Region 3lcn B 101-105 disorder
Seq 205-242 Hetero trimer : IID00094Complex
 Evidence X-RAY 4jlq B Reference
       Region 4jlq B 205-233 disorder
       Region 4jlq B 234-240 order
       Region 4jlq B 241-242 disorder
Seq 253-333 Monomer :
 Evidence NMR 3zj1 A Reference
       Region 3zj1 A 253-333 order
       Region 3zj1 A 253-256 high_rmsd
       Region 3zj1 A 324-333 high_rmsd
Seq 333-401 Monomer :
 Evidence NMR 3zj2 A Reference
       Region 3zj2 A 333-401 order
       Region 3zj2 A 333-334 high_rmsd
       Region 3zj2 A 396-401 high_rmsd
Seq 409-483 Monomer :
 Evidence NMR 2lhn A Reference
       Region 2lhn A 409-483 order
       Region 2lhn A 483-483 high_rmsd
Seq 409-483 Homo tetramer :
 Evidence X-RAY 5l2l A Reference
       Region 5l2l A 409-479 order
       Region 5l2l A 480-483 disorder
 Evidence X-RAY 5l2l B Reference
       Region 5l2l B 409-480 order
       Region 5l2l B 481-483 disorder
 Evidence X-RAY 5l2l E Reference
       Region 5l2l E 409-480 order
       Region 5l2l E 481-483 disorder
 Evidence X-RAY 5l2l F Reference
       Region 5l2l F 409-481 order
       Region 5l2l F 482-483 disorder
SeqProS possible 235-238 Nuclear Localization Signal (NLS) Hetero trimer : IID00094Complex
       Region 4jlq B 234-240 order
 
Prediction
DICHOT
Disorder 1-5,95-251,320-332,402-408,484-525
Known Domain 6-94,252-319,333-401,409-483
Pfam RPS-Blast
     PF11517 1-98 2e-33 Nuclear abundant poly(A) RNA-b...
     PF15258 96-201 3e-07 Protein family of FAM222A
     PF18260 252-278 1e-07 Nuclear polyadenylated RNA-...
Pfam Hmmer
    PF11517 1-99 1.8e-52 Nuclear abundant poly(A) RNA-...
    PF18260 252-278 3.8e-20 Nuclear polyadenylated RNA...
    PF14608 340-356 6.6e-09 RNA-binding, Nab2-type zin...
    PF14608 414-430 1.9e-08 RNA-binding, Nab2-type zin...
    PF14608 437-453 3e-07 RNA-binding, Nab2-type zinc ...
    PF14608 457-474 3.9e-09 RNA-binding, Nab2-type zin...