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IID90035
UniprotP12506
ProteinProtein Tat
Genetat
OrganismHuman immunodeficiency virus type 1 group M subtype D
Sequence LLPS PhaSepDB
PhaSePro
LLPSDB
DrLLPS
Network xml rdf
Structure
Experiment
  :order   disorder   conflict   PDB cluster   ProS   Pfam Domain   SEG
86
 order/disorder by at least rule
     disorder by at least rule
     order by at least rule
 order/disorder by majority rule
Seq 1-9 Hetero hexamer : P27487
 Evidence X-RAY 2bgn Z Reference
       Region 2bgn Z 1-6 order
       Region 2bgn Z 7-9 disorder
 Evidence X-RAY 2bgn Y Reference
       Region 2bgn Y 1-6 order
       Region 2bgn Y 7-9 disorder
 Evidence X-RAY 2bgn X Reference
       Region 2bgn X 1-6 order
       Region 2bgn X 7-9 disorder
 Evidence X-RAY 2bgn W Reference
       Region 2bgn W 1-6 order
       Region 2bgn W 7-9 disorder
Seq 1-9 Hetero tetramer : P27487
 Evidence X-RAY 2bgr Z Reference
       Region 2bgr Z 1-3 order
       Region 2bgr Z 4-9 disorder
 Evidence X-RAY 2bgr Y Reference
       Region 2bgr Y 1-3 order
       Region 2bgr Y 4-9 disorder
Seq 1-86 Monomer :
 Evidence NMR 1tiv A Reference
       Region 1tiv A 1-86 order
       Region 1tiv A 1-36 high_rmsd
       Region 1tiv A 50-86 high_rmsd
 Evidence NMR 1tbc A Reference
       Region 1tbc A 2-86 order
 Evidence NMR 1tac A Reference
       Region 1tac A 2-86 order
Seqacetylation
    28-28 N6-acetyllysine; by host PCAF
    50-50 N6-acetyllysine; by host EP300 and GCN5L2
    51-51 N6-acetyllysine; by host EP300 and GCN5L2
 
Prediction
NeProc
Disorder 1-7,50-86
Order 8-49
ProS 1-7,59-71,77-86
AlphaFold
Disorder 50-69,74-86
Order 1-49,70-73
Pfam Hmmer
PF00539 2-68 1.3e-30
SEG 49-57
Function
Function in SwissProt
Nuclear transcriptional activator of viral gene expression, that is essential for viral transcription from the LTR promoter and replication. Acts as a sequence-specific molecular adapter, directing components of the cellular transcription machinery to the viral RNA to promote processive transcription elongation by the RNA polymerase II (RNA pol II) complex, thereby increasing the level of full-length transcripts. In the absence of Tat, the RNA Pol II generates short or non-processive transcripts that terminate at approximately 60 bp from the initiation site. Tat associates with the CCNT1/cyclin-T1 component of the P-TEFb complex (CDK9 and CCNT1), which promotes RNA chain elongation. This binding increases Tat's affinity for a hairpin structure at the 5'-end of all nascent viral mRNAs referred to as the transactivation responsive RNA element (TAR RNA) and allows Tat/P-TEFb complex to bind cooperatively to TAR RNA. The CDK9 component of P-TEFb and other Tat-activated kinases hyperphosphorylate the C-terminus of RNA Pol II that becomes stabilized and much more processive. Other factors such as HTATSF1/Tat-SF1, SUPT5H/SPT5, and HTATIP2 are also important for Tat's function. Besides its effect on RNA Pol II processivity, Tat induces chromatin remodeling of proviral genes by recruiting the histone acetyltransferases (HATs) CREBBP, EP300 and PCAF to the chromatin. This also contributes to the increase in proviral transcription rate, especially when the provirus integrates in transcriptionally silent region of the host genome. To ensure maximal activation of the LTR, Tat mediates nuclear translocation of NF-kappa-B by interacting with host RELA. Through its interaction with host TBP, Tat may also modulate transcription initiation. Tat can reactivate a latently infected cell by penetrating in it and transactivating its LTR promoter. In the cytoplasm, Tat is thought to act as a translational activator of HIV-1 mRNAs.
Extracellular circulating Tat can be endocytosed by surrounding uninfected cells via the binding to several surface receptors such as CD26, CXCR4, heparan sulfate proteoglycans (HSPG) or LDLR. Neurons are rarely infected, but they internalize Tat via their LDLR. Through its interaction with nuclear HATs, Tat is potentially able to control the acetylation-dependent cellular gene expression. Modulates the expression of many cellular genes involved in cell survival, proliferation or in coding for cytokines or cytokine receptors. Tat plays a role in T-cell and neurons apoptosis. Tat induced neurotoxicity and apoptosis probably contribute to neuroAIDS. Circulating Tat also acts as a chemokine-like and/or growth factor-like molecule that binds to specific receptors on the surface of the cells, affecting many cellular pathways. In the vascular system, Tat binds to ITGAV/ITGB3 and ITGA5/ITGB1 integrins dimers at the surface of endothelial cells and competes with bFGF for heparin-binding sites, leading to an excess of soluble bFGF.