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IID50284
UniprotP52912
ProteinCytotoxic granule associated RNA binding protein TIA1
GeneTia1
OrganismMus musculus
Sequence LLPS PhaSepDB
PhaSePro
LLPSDB
DrLLPS
xml rdf
Structure
Experiment
  :order   disorder   conflict   PDB cluster   ProS   Pfam Domain   SEG
386
 order/disorder by at least rule
     disorder by at least rule
     order by at least rule
 order/disorder by majority rule
Seq 87-92,104-199 Monomer :
 Evidence NMR 2rne A 93-104 deletion Reference
       Region 2rne A 87-92 order
       Region 2rne A 87-89 high_rmsd
       Region 2rne A 105-199 order
       Region 2rne A 174-188 high_rmsd
 Evidence NMR 2dgo A 93-103 deletion Reference
       Region 2dgo A 87-92 order
       Region 2dgo A 87-89 high_rmsd
       Region 2dgo A 104-199 order
       Region 2dgo A 174-188 high_rmsd
Seqacetylation
    1-1 N-acetylmethionine
 
Prediction
NeProc
Disorder 1-3,88-96,185-206,288-307,317-386
Order 4-83,103-184,207-287,308-316
ProS 201-206,303-307,317-346,352-356,375-386
AlphaFold
Disorder 1-3,41-44,83-104,184-199,287-386
Order 4-40,45-82,105-183,200-286
Pfam Hmmer
PF00076 9-78 5e-28
PF00076 108-179 3.6e-30
PF00076 216-281 2.2e-22
SEG 59-65 ,82-104
Function
Function in SwissProt
RNA-binding protein involved in the regulation of alternative pre-RNA splicing and mRNA translation by binding to uridine-rich (U-rich) RNA sequences (PubMed:10938105, PubMed:16227602). Binds to U-rich sequences immediately downstream from a 5' splice sites in a uridine-rich small nuclear ribonucleoprotein (U snRNP)-dependent fashion, thereby modulating alternative pre-RNA splicing (PubMed:10938105). Preferably binds to the U-rich IAS1 sequence in a U1 snRNP-dependent manner; this binding is optimal if a 5' splice site is adjacent to IAS1 (PubMed:10938105). Activates the use of heterologous 5' splice sites; the activation depends on the intron sequence downstream from the 5' splice site, with a preference for a downstream U-rich sequence (PubMed:10938105). By interacting with SNRPC/U1-C, promotes recruitment and binding of spliceosomal U1 snRNP to 5' splice sites followed by U-rich sequences, thereby facilitating atypical 5' splice site recognition by U1 snRNP (By similarity). Activates splicing of alternative exons with weak 5' splice sites followed by a U-rich stretch on its own pre-mRNA and on TIAR mRNA (PubMed:11514562). Acts as a modulator of alternative splicing for the apoptotic FAS receptor, thereby promoting apoptosis (By similarity). Binds to the 5' splice site region of FAS intron 5 to promote accumulation of transcripts that include exon 6 at the expense of transcripts in which exon 6 is skipped, thereby leading to the transcription of a membrane-bound apoptotic FAS receptor, which promotes apoptosis (By similarity). Binds to a conserved AU-rich cis element in COL2A1 intron 2 and modulates alternative splicing of COL2A1 exon 2 (By similarity). Also binds to the equivalent AT-rich element in COL2A1 genomic DNA, and may thereby be involved in the regulation of transcription (By similarity). Involved in the repression of mRNA translation by binding to AU-rich elements (AREs) located in mRNA 3' untranslated regions (3' UTRs), including target ARE-bearing mRNAs encoding TNF and PTGS2 (PubMed:16227602, PubMed:10921895). Also participates in the cellular response to environmental stress, by acting downstream of the stress-induced phosphorylation of EIF2S1/EIF2A to promote the recruitment of untranslated mRNAs to cytoplasmic stress granules (SGs), leading to stress-induced translational arrest (By similarity). Formation and recruitment to SGs is regulated by Zn(2+) (PubMed:29298433). Possesses nucleolytic activity against cytotoxic lymphocyte target cells (By similarity).