| PSCID | Protein Name | Free form | Bound form | Ligands | Classification(?) |
| ID.1 | TRANSLATION INITIATION FACTOR IF2/EIF5B | 1g7r_A | 1g7t_A | GNP | 021200 |
| ID.2 | LYSYL-TRNA SYNTHETASE | 1bbw_AA | 1bbu_AA | 2xLYS | 020102 |
| ID.3 | HISTIDYL-TRNA SYNTHETASE | 1h4v_BB | 1ady_AB | 2xHAM | 013400 |
| ID.4 | PENICILLIN-BINDING PROTEIN 2 | 2olu_A | 2olv_A | M0E | 012000 |
| ID.5 | TETRACYCLINE REPRESSOR PROTEIN | 2ns7_AB | 2ns8_CD | PEPT(WTWNAYAFAAPS),PEPT(WTWNAYAFAAP) | 012000 |
| ID.6 | ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE | 1o17_BC | 1zxy_AD | 4xMG,2xPRP | 012000 |
| ID.7 | ARGININE KINASE | 1m80_A | 1bg0_A | ADP,DAR | 011101 |
| ID.8 | ACETYL TRANSFERASE | 1z9u_AB | 1s7n_AB | 2xCOA | 011101 |
| ID.9 | 235AA LONG HYPOTHETICAL BIOTIN--[ACETYL-COA-CARBOXYLASE] LIGASE | 2hni_AB | 2dth_AB | 2xADP,2xBTN | 011101 |
| ID.10 | UDP-N-ACETYLMURAMOYL-L-ALANINE:D-GLUTAMATE LIGASE | 1e0d_A | 1eeh_A | UMA | 011100 |
| ID.11 | SUCCINYLARGININE DIHYDROLASE | 1ynf_CE | 1ynh_AD | 2xSUO | 011010 |
| ID.12 | 2-C-METHYL-D-ERYTHRITOL 4-PHOSPHATE CYTIDYLYLTRANSFERASE | 1vgt_AB | 1i52_AA | 2xCTP | 011001 |
| ID.13 | RIBOSOMAL PROTEIN L11 METHYLTRANSFERASE | 2nxc_A | 2nxe_A | SAM | 011000 |
| ID.14 | NICOTINAMIDE NUCLEOTIDE TRANSHYDROGENASE, SUBUNIT ALPHA 1 | 1l7d_CD | 1l7e_AB | NAI | 011000 |
| ID.15 | REGULATOR OF NONSENSE TRANSCRIPTS 1 | 2gk7_A | 2gk6_A | ADP | 010702 |
| ID.16 | MYOSIN II HEAVY CHAIN | 1fmv_A | 1w9j_A | ADP | 010501 |
| ID.17 | LIPOPOLYSACCHARIDE HEPTOSYLTRANSFERASE-1 | 2gt1_A | 2h1f_B | ADP | 010302 |
| ID.18 | TAQ DNA POLYMERASE | 1cmw_A | 1taq_A | BGL,ZN | 010210 |
| ID.19 | POLY(A) POLYMERASE | 2o1p_A | 2hhp_A | 2xFLC | 010202 |
| ID.20 | INOSITOL-TRISPHOSPHATE 3-KINASE A | 1w2f_A | 1w2d_B | 4IP,ADP | 010202 |
| ID.21 | TRANSPORTIN-1 | 2qmr_D | 2z5k_A | PEPT(PRVRYNPYTTRP) | 010201 |
| ID.22 | GELSOLIN | 2fh4_B | 1p8x_C | 3xCA | 010111 |
| ID.23 | TRANSCRIPTIONAL REPRESSOR SMTB | 1smt_AB | 1r22_AB | 2xZN | 010110 |
| ID.24 | INTERFERON-INDUCIBLE GTPASE | 1tqd_A | 1tq6_A | GNP,MG | 010102 |
| ID.25 | ADENOSINE KINASE | 2pkf_BB | 2pkn_AA | 2xACP | 010102 |
| ID.26 | FERRIPYOVERDINE RECEPTOR | 2o5p_B | 2iah_A | PVD | 010101 |
| ID.27 | MALTOSE-BINDING PROTEIN MONOBODY YS1 FUSION | 3csg_A | 3csb_A | 1PE,MN,PG4,PGE | 010101 |
| ID.28 | JUMONJI DOMAIN-CONTAINING PROTEIN 2A | 2gf7_C | 2gfa_B | 2xPEPT(ARTKQTA) | 010101 |
| ID.29 | DERMONECROTIC TOXIN | 2ec5_A | 2ebf_X | 2xTRE | 010101 |
| ID.30 | PHENYLALANINE-4-HYDROXYLASE | 1j8t_AA | 1mmt_AA | 2xH4B,2xNLE | 010020 |
| ID.31 | CELL DIVISION PROTEIN FTSA | 1e4f_T | 1e4g_T | ATP | 010010 |
| ID.32 | HIGH-AFFINITY ZINC UPTAKE SYSTEM PROTEIN ZNUA | 2ps3_A | 2ps0_A | ZN | 010010 |
| ID.33 | 2,4-DIENOYL-COA REDUCTASE | 1gu7_AB | 1guf_AB | 2xNDP | 010004 |
| ID.34 | BETA NERVE GROWTH FACTOR | 1bet_AA | 1btg_BC | 2xZN | 010003 |
| ID.35 | RIBONUCLEASE, SEMINAL | 1r5d_AB | 1tq9_AB | 2xCPA | 010002 |
| ID.36 | COMPLEMENT CONTROL PROTEIN | 1g40_A | 1rid_B | 3xIDS,4xSGN | 010002 |
| ID.37 | TRANSCRIPTIONAL REGULATOR MNTR | 2hyg_DD | 2f5f_AB | 4xMN | 010002 |
| ID.38 | SIALIDASE | 1eut_A | 1w8n_A | DAN,GAL | 010002 |
| ID.39 | EOSINOPHIL CATIONIC PROTEIN | 1qmt_A | 1dyt_A | 2xCIT | 010002 |
| ID.40 | URACIL-DNA GLYCOSYLASE | 3eug_A | 1flz_A | URA | 010002 |
| ID.41 | PUTATIVE SAM-DEPENDENT RNA METHYLTRANSFERASE | 1wxx_CD | 2cww_BB | 2xSAH | 010002 |
| ID.42 | ENDODEOXYRIBONUCLEASE I | 1fzr_CD | 1m0d_AB | 2xMN | 010002 |
| ID.43 | CHITINASE B | 1ogb_AB | 1w1y_AB | 7xTYP | 010002 |
| ID.44 | GLUCOSE 6-PHOSPHATE DEHYDROGENASE | 1dpg_AB | 2dpg_AA | 2xNAP | 010002 |
| ID.45 | ADP-RIBOSYL CYCLASE | 1r0s_AB | 1r15_AB | 4xNCA,2xROB | 010002 |
| ID.46 | GLUTAMYL-TRNA SYNTHETASE | 2cfo_B | 2cfo_A | GLU | 010002 |
| ID.47 | DIPEPTIDYL PEPTIDASE IV | 2i78_CD | 1u8e_AB | 11xNAG,5xNDG | 010002 |
| ID.48 | FOLLISTATIN | 1lr9_A | 1lr8_A | IHS | 010002 |
| ID.49 | IMMUNOGLOBULIN LAMBDA DIMER MCG (LIGHT CHAIN) | 1dcl_AB | 1mcs_AB | 2xPEPT(QFHP) | 010001 |
| ID.50 | GROWTH FACTOR RECEPTOR-BOUND PROTEIN 2 | 1jyu_A | 1jyr_A | PEPT(APSYVNVQN) | 010001 |
| ID.51 | CYANOVIRIN-N | 3ezm_AA | 1l5b_AB | NHE | 010001 |
| ID.52 | SECRETED EFFECTOR PROTEIN | 2qza_A | 2qyu_A | B3P | 010001 |
| ID.53 | PHOSPHOGLYCERATE KINASE 1 | 3c3b_A | 2zgv_A | ADP | 010001 |
| ID.54 | DNAD-LIKE REPLICATION PROTEIN | 2zc2_A | 2zc2_B | ZN | 010001 |
| ID.55 | SIGNAL RECOGNITION PARTICLE 43 KDA PROTEIN | 3deo_A | 3dep_A | PEPT(YPGGSFDPLGLA) | 010001 |
| ID.56 | PECTATE LYASE | 2v8i_A | 2v8j_A | MN | 010001 |
| ID.57 | JAGGED-1 | 2vj2_A | 2vj2_B | MLT | 010001 |
| ID.58 | HYPOTHETICAL PROTEIN | 1rki_A | 1rki_B | P6G | 010001 |
| ID.59 | CHITINASE A | 3b8s_B | 3b9d_A | 4xNAG | 010001 |
| ID.60 | PSEUDECIN | 2ddb_A | 2epf_D | ZN | 010001 |
| ID.61 | ABC TRANSPORTER, ATP BINDING PROTEIN | 1oxs_C | 1oxu_C | ADP | 010001 |
| ID.62 | EXOPOLYPHOSPHATASE | 2j4r_B | 1t6c_A | CA | 010001 |
| ID.63 | REPLICASE POLYPROTEIN 1AB (PP1AB) | 1uk2_AB | 2z3c_AA | 2xPEPT(VTL),2xECQ | 010001 |
| ID.64 | FLAGELLUM-SPECIFIC ATP SYNTHASE | 2dpy_A | 2dpy_B | ADP | 010001 |
| ID.65 | URE2 PROTEIN | 1g6y_AB | 1jzr_CD | GTT | 010001 |
| ID.66 | DATP PYROPHOSPHOHYDROLASE | 2o1c_D | 2o1c_A | PPV | 010001 |
| ID.67 | OUTER PROTEIN YOPM | 1g9u_A | 1jl5_A | 2xCA | 010001 |
| ID.68 | DNA HELICASE UVSW | 1rif_A | 1rif_B | MG | 010001 |
| ID.69 | LETHAL(3)MALIGNANT BRAIN TUMOR-LIKE PROTEIN | 2rjc_B | 2rhu_A | PG4 | 010001 |
| ID.70 | LECTIN-D2 | 1uln_A | 1uha_A | CA | 010001 |