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IID00950
UniprotP54278
ProteinMismatch repair endonuclease PMS2
GenePMS2
OrganismHomo sapiens
Sequence LLPS PhaSepDB
PhaSePro
LLPSDB
DrLLPS
Network xml rdf
Structure
Experiment
  :order   disorder   conflict   PDB cluster   ProS   Pfam Domain   SEG
862
 order/disorder by at least rule
     disorder by at least rule
     order by at least rule
 order/disorder by majority rule
Seq 1-365 Monomer :
 Evidence X-RAY 1ea6 A Reference
       Region 1ea6 A 1-26 disorder
       Region 1ea6 A 27-85 order
       Region 1ea6 A 86-108 disorder
       Region 1ea6 A 109-332 order
       Region 1ea6 A 333-343 disorder
       Region 1ea6 A 344-364 order
 Evidence X-RAY 1ea6 B Reference
       Region 1ea6 B 1-26 disorder
       Region 1ea6 B 27-85 order
       Region 1ea6 B 86-108 disorder
       Region 1ea6 B 109-333 order
       Region 1ea6 B 334-343 disorder
       Region 1ea6 B 344-364 order
 Evidence X-RAY 1h7s A Reference
       Region 1h7s A 1-28 disorder
       Region 1h7s A 29-85 order
       Region 1h7s A 86-95 disorder
       Region 1h7s A 96-335 order
       Region 1h7s A 336-341 disorder
       Region 1h7s A 342-365 order
 Evidence X-RAY 1h7s B Reference
       Region 1h7s B 1-32 disorder
       Region 1h7s B 33-85 order
       Region 1h7s B 86-107 disorder
       Region 1h7s B 108-333 order
       Region 1h7s B 334-342 disorder
       Region 1h7s B 343-365 order
 Evidence X-RAY 1h7u A Reference
       Region 1h7u A 1-30 disorder
       Region 1h7u A 31-86 order
       Region 1h7u A 87-107 disorder
       Region 1h7u A 108-335 order
       Region 1h7u A 336-341 disorder
       Region 1h7u A 342-364 order
       Region 1h7u A 365-365 disorder
 Evidence X-RAY 1h7u B Reference
       Region 1h7u B 1-31 disorder
       Region 1h7u B 32-85 order
       Region 1h7u B 86-108 disorder
       Region 1h7u B 109-333 order
       Region 1h7u B 334-342 disorder
       Region 1h7u B 343-364 order
       Region 1h7u B 365-365 disorder
Seq 1-365 Homo dimer :
 Evidence X-RAY 6mfq A Reference
       Region 6mfq A 1-32 disorder
       Region 6mfq A 33-85 order
       Region 6mfq A 86-108 disorder
       Region 6mfq A 109-334 order
       Region 6mfq A 335-341 disorder
       Region 6mfq A 342-365 order
 Evidence X-RAY 6mfq B Reference
       Region 6mfq B 1-32 disorder
       Region 6mfq B 33-85 order
       Region 6mfq B 86-108 disorder
       Region 6mfq B 109-333 order
       Region 6mfq B 334-341 disorder
       Region 6mfq B 342-365 order
 Evidence X-RAY 7rcb A Reference
       Region 7rcb A 1-31 disorder
       Region 7rcb A 32-84 order
       Region 7rcb A 85-102 disorder
       Region 7rcb A 103-105 order
       Region 7rcb A 106-108 disorder
       Region 7rcb A 109-333 order
       Region 7rcb A 334-342 disorder
       Region 7rcb A 343-365 order
 Evidence X-RAY 7rcb B Reference
       Region 7rcb B 1-32 disorder
       Region 7rcb B 33-85 order
       Region 7rcb B 86-109 disorder
       Region 7rcb B 110-333 order
       Region 7rcb B 334-346 disorder
       Region 7rcb B 347-364 order
       Region 7rcb B 365-365 disorder
 Evidence X-RAY 7rci A Reference
       Region 7rci A 1-29 disorder
       Region 7rci A 30-85 order
       Region 7rci A 86-93 disorder
       Region 7rci A 94-105 order
       Region 7rci A 106-108 disorder
       Region 7rci A 109-335 order
       Region 7rci A 336-342 disorder
       Region 7rci A 343-364 order
       Region 7rci A 365-365 disorder
 Evidence X-RAY 7rci B Reference
       Region 7rci B 1-32 disorder
       Region 7rci B 33-84 order
       Region 7rci B 85-108 disorder
       Region 7rci B 109-331 order
       Region 7rci B 332-344 disorder
       Region 7rci B 345-364 order
       Region 7rci B 365-365 disorder
 Evidence X-RAY 7rck A Reference
       Region 7rck A 1-32 disorder
       Region 7rck A 33-84 order
       Region 7rck A 85-101 disorder
       Region 7rck A 102-104 order
       Region 7rck A 105-108 disorder
       Region 7rck A 109-333 order
       Region 7rck A 334-341 disorder
       Region 7rck A 342-364 order
       Region 7rck A 365-365 disorder
 Evidence X-RAY 7rck B Reference
       Region 7rck B 1-31 disorder
       Region 7rck B 32-84 order
       Region 7rck B 85-108 disorder
       Region 7rck B 109-255 order
       Region 7rck B 256-261 disorder
       Region 7rck B 262-329 order
       Region 7rck B 330-345 disorder
       Region 7rck B 346-364 order
       Region 7rck B 365-365 disorder
Seq 573-583 Hetero dimer : IID50009Complex
 Evidence X-RAY 5u5r B Reference
       Region 5u5r B 573-583 order
SeqProS possible 573-583 Nuclear Localization Signal (NLS) Hetero dimer : IID50009Complex
       Region 5u5r B 573-583 order
Seqphosphorylation
    597-597 Phosphothreonine
    573-573 Phosphothreonine
 
Prediction
NeProc
Disorder 1-13,259-261,371-618,636-660
Order 14-258,262-370,619-635,661-862
ProS 259-261,412-452,460-519,528-533,539-618,636-660
AlphaFold
Disorder 1-13,95-96,98-103,105-107,259-265,338-339,366-613,636-646,650-650,774-774,776-776,859-862
Order 14-94,97-97,104-104,108-258,266-337,340-365,614-635,647-649,651-773,775-775,777-858
SEG 344-356
Function
Function in SwissProt
Component of the post-replicative DNA mismatch repair system (MMR) (PubMed:30653781, PubMed:35189042). Heterodimerizes with MLH1 to form MutL alpha. DNA repair is initiated by MutS alpha (MSH2-MSH6) or MutS beta (MSH2-MSH3) binding to a dsDNA mismatch, then MutL alpha is recruited to the heteroduplex. Assembly of the MutL-MutS-heteroduplex ternary complex in presence of RFC and PCNA is sufficient to activate endonuclease activity of PMS2. It introduces single-strand breaks near the mismatch and thus generates new entry points for the exonuclease EXO1 to degrade the strand containing the mismatch. DNA methylation would prevent cleavage and therefore assure that only the newly mutated DNA strand is going to be corrected. MutL alpha (MLH1-PMS2) interacts physically with the clamp loader subunits of DNA polymerase III, suggesting that it may play a role to recruit the DNA polymerase III to the site of the MMR. Also implicated in DNA damage signaling, a process which induces cell cycle arrest and can lead to apoptosis in case of major DNA damages. Possesses an ATPase activity, but in the absence of gross structural changes, ATP hydrolysis may not be necessary for proficient mismatch repair (PubMed:35189042).
Biological Process
See also
Diagram with PDB data
MSH2/MSH6/DNAhuman MutSalpha (MSH2/MSH6) bound to ADP and a G T mispair
MSH2/MSH3/DNAHuman MutSbeta complexed with an IDL of 4 bases (Loop4) and ADP