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IID90035
UniprotP12506
ProteinProtein Tat
Genetat
OrganismHuman immunodeficiency virus type 1 group M subtype D (isolate Z2/CDC-Z34)
Sequence LLPS PhaSepDB
PhaSePro
LLPSDB
DrLLPS
Network xml rdf
Structure
Experiment
  :order   disorder   conflict   PDB cluster   ProS   Pfam Domain   SEG
86
 order/disorder by at least rule
     disorder by at least rule
     order by at least rule
 order/disorder by majority rule
Seq 1-9 Hetero tetramer : P27487
 Evidence X-RAY 2bgr Y Reference
       Region 2bgr Y 1-3 order
       Region 2bgr Y 4-9 disorder
 Evidence X-RAY 2bgr Z Reference
       Region 2bgr Z 1-3 order
       Region 2bgr Z 4-9 disorder
Seq 1-9 Hetero dodecamer : P27487
 Evidence X-RAY 2bgn W Reference
       Region 2bgn W 1-6 order
       Region 2bgn W 7-9 disorder
 Evidence X-RAY 2bgn X Reference
       Region 2bgn X 1-6 order
       Region 2bgn X 7-9 disorder
 Evidence X-RAY 2bgn Y Reference
       Region 2bgn Y 1-6 order
       Region 2bgn Y 7-9 disorder
 Evidence X-RAY 2bgn Z Reference
       Region 2bgn Z 1-6 order
       Region 2bgn Z 7-9 disorder
Seq 1-86 Monomer :
 Evidence NMR 1tac A Reference
       Region 1tac A 2-86 order
 Evidence NMR 1tbc A Reference
       Region 1tbc A 2-86 order
 Evidence NMR 1tiv A Reference
       Region 1tiv A 1-86 order
       Region 1tiv A 1-36 high_rmsd
       Region 1tiv A 50-86 high_rmsd
Seq 37-59 Hetero tetramer : Q9NTG7
 Evidence X-RAY 8ccz C Reference
       Region 8ccz C 37-43 disorder
       Region 8ccz C 44-57 order
       Region 8ccz C 58-59 disorder
 Evidence X-RAY 8ccz D Reference
       Region 8ccz D 37-43 disorder
       Region 8ccz D 44-57 order
       Region 8ccz D 58-59 disorder
Seq 46-54 Hetero dimer : Q9NTG7
 Evidence X-RAY 8ccw B Reference
       Region 8ccw B 46-54 order
SeqProS possible 1-6 Same region of the Tat homolog (P04608, 79.1% identity) is disordered in the free state. Hetero tetramer : P27487
       Region 2bgr Y 1-3 order
       Region 2bgr Z 1-3 order
SeqProS possible 1-6 Same region of the Tat homolog (P04608, 79.1% identity) is disordered in the free state. Hetero dodecamer : P27487
       Region 2bgn W 1-6 order
       Region 2bgn X 1-6 order
       Region 2bgn Y 1-6 order
       Region 2bgn Z 1-6 order
SeqProS possible 44-57 Same region of the Tat homolog (P04608, 79.1% identity) is disordered in the free state. Hetero dimer : Q9NTG7
       Region 8ccw B 46-54 order
SeqProS possible 44-57 Same region of the Tat homolog (P04608, 79.1% identity) is disordered in the free state. Hetero tetramer : Q9NTG7
       Region 8ccz C 44-57 order
       Region 8ccz D 44-57 order
Seqacetylation
    28-28 N6-acetyllysine; by host PCAF
    51-51 N6-acetyllysine; by host EP300 and GCN5L2
    50-50 N6-acetyllysine; by host EP300 and GCN5L2
 
Prediction
NeProc
Disorder 1-7,50-86
Order 8-49
ProS 1-7,59-71,77-86
Pfam Hmmer
PF00539 2-68 1.3e-30
SEG 49-57
Function
Function in SwissProt
Transcriptional activator that increases RNA Pol II processivity, thereby increasing the level of full-length viral transcripts. Recognizes a hairpin structure at the 5'-LTR of the nascent viral mRNAs referred to as the transactivation responsive RNA element (TAR) and recruits the cyclin T1-CDK9 complex (P-TEFb complex) that will in turn hyperphosphorylate the RNA polymerase II to allow efficient elongation. The CDK9 component of P-TEFb and other Tat-activated kinases hyperphosphorylate the C-terminus of RNA Pol II that becomes stabilized and much more processive. Other factors such as HTATSF1/Tat-SF1, SUPT5H/SPT5, and HTATIP2 are also important for Tat's function. Besides its effect on RNA Pol II processivity, Tat induces chromatin remodeling of proviral genes by recruiting the histone acetyltransferases (HATs) CREBBP, EP300 and PCAF to the chromatin. This also contributes to the increase in proviral transcription rate, especially when the provirus integrates in transcriptionally silent region of the host genome. To ensure maximal activation of the LTR, Tat mediates nuclear translocation of NF-kappa-B by interacting with host RELA. Through its interaction with host TBP, Tat may also modulate transcription initiation. Tat can reactivate a latently infected cell by penetrating in it and transactivating its LTR promoter. In the cytoplasm, Tat is thought to act as a translational activator of HIV-1 mRNAs.
Extracellular circulating Tat can be endocytosed by surrounding uninfected cells via the binding to several surface receptors such as CD26, CXCR4, heparan sulfate proteoglycans (HSPG) or LDLR. Neurons are rarely infected, but they internalize Tat via their LDLR. Through its interaction with nuclear HATs, Tat is potentially able to control the acetylation-dependent cellular gene expression. Modulates the expression of many cellular genes involved in cell survival, proliferation or in coding for cytokines or cytokine receptors. Tat plays a role in T-cell and neurons apoptosis. Tat induced neurotoxicity and apoptosis probably contribute to neuroAIDS. Circulating Tat also acts as a chemokine-like and/or growth factor-like molecule that binds to specific receptors on the surface of the cells, affecting many cellular pathways. In the vascular system, Tat binds to ITGAV/ITGB3 and ITGA5/ITGB1 integrins dimers at the surface of endothelial cells and competes with bFGF for heparin-binding sites, leading to an excess of soluble bFGF.
Biological Process
Diagram with PDB data
tat/SIRT3Crystal structure of human Sirt3 in complex with an inhibiting HIV1 Tat-37-59 peptide