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IID00743
UniprotQ9Y4B6
ProteinDDB1- and CUL4-associated factor 1
GeneDCAF1
OrganismHomo sapiens
Sequence LLPS PhaSepDB
PhaSePro
LLPSDB
DrLLPS
Network xml rdf
Structure
Experiment
  :order   disorder   conflict   PDB cluster   ProS   Pfam Domain   SEG
1507
 order/disorder by at least rule
     disorder by at least rule
     order by at least rule
 order/disorder by majority rule
Seq 1039-1401 Homo dimer :
 Evidence X-RAY 4pxw A Reference
       Region 4pxw A 1039-1079 disorder
       Region 4pxw A 1080-1314 order
       Region 4pxw A 1315-1326 disorder
       Region 4pxw A 1327-1373 order
       Region 4pxw A 1374-1379 disorder
       Region 4pxw A 1380-1389 order
       Region 4pxw A 1390-1401 disorder
 Evidence X-RAY 4pxw B Reference
       Region 4pxw B 1039-1079 disorder
       Region 4pxw B 1080-1314 order
       Region 4pxw B 1315-1326 disorder
       Region 4pxw B 1327-1373 order
       Region 4pxw B 1374-1378 disorder
       Region 4pxw B 1379-1389 order
       Region 4pxw B 1390-1401 disorder
 Evidence X-RAY 7sse A Reference
       Region 7sse A 1077-1078 disorder
       Region 7sse A 1079-1314 order
       Region 7sse A 1315-1326 disorder
       Region 7sse A 1327-1372 order
       Region 7sse A 1373-1373 disorder
       Region 7sse A 1374-1389 order
       Region 7sse A 1390-1390 disorder
 Evidence X-RAY 7sse B Reference
       Region 7sse B 1077-1078 disorder
       Region 7sse B 1079-1167 order
       Region 7sse B 1168-1168 disorder
       Region 7sse B 1169-1314 order
       Region 7sse B 1315-1326 disorder
       Region 7sse B 1327-1374 order
       Region 7sse B 1375-1379 disorder
       Region 7sse B 1380-1390 order
 Evidence X-RAY 7ufv A Reference
       Region 7ufv A 1077-1078 disorder
       Region 7ufv A 1079-1314 order
       Region 7ufv A 1315-1325 disorder
       Region 7ufv A 1326-1373 order
       Region 7ufv A 1374-1378 disorder
       Region 7ufv A 1379-1389 order
       Region 7ufv A 1390-1390 disorder
 Evidence X-RAY 7ufv B Reference
       Region 7ufv B 1077-1078 disorder
       Region 7ufv B 1079-1315 order
       Region 7ufv B 1316-1326 disorder
       Region 7ufv B 1327-1372 order
       Region 7ufv B 1373-1379 disorder
       Region 7ufv B 1380-1389 order
       Region 7ufv B 1390-1390 disorder
 Evidence X-RAY 8f8e A Reference
       Region 8f8e A 1077-1079 disorder
       Region 8f8e A 1080-1314 order
       Region 8f8e A 1315-1326 disorder
       Region 8f8e A 1327-1373 order
       Region 8f8e A 1374-1379 disorder
       Region 8f8e A 1380-1390 order
 Evidence X-RAY 8f8e B Reference
       Region 8f8e B 1077-1078 disorder
       Region 8f8e B 1079-1314 order
       Region 8f8e B 1315-1326 disorder
       Region 8f8e B 1327-1390 order
Seq 1039-1401 Monomer :
 Evidence X-RAY 8og5 A Reference
       Region 8og5 A 1039-1079 disorder
       Region 8og5 A 1080-1317 order
       Region 8og5 A 1318-1331 disorder
       Region 8og5 A 1332-1390 order
       Region 8og5 A 1391-1401 disorder
 Evidence X-RAY 8og6 A Reference
       Region 8og6 A 1039-1079 disorder
       Region 8og6 A 1080-1315 order
       Region 8og6 A 1316-1325 disorder
       Region 8og6 A 1326-1390 order
       Region 8og6 A 1391-1401 disorder
 Evidence X-RAY 8og7 A Reference
       Region 8og7 A 1039-1079 disorder
       Region 8og7 A 1080-1315 order
       Region 8og7 A 1316-1325 disorder
       Region 8og7 A 1326-1389 order
       Region 8og7 A 1390-1401 disorder
 Evidence X-RAY 8og8 A Reference
       Region 8og8 A 1039-1079 disorder
       Region 8og8 A 1080-1315 order
       Region 8og8 A 1316-1325 disorder
       Region 8og8 A 1326-1390 order
       Region 8og8 A 1391-1401 disorder
 Evidence X-RAY 8og9 A Reference
       Region 8og9 A 1039-1079 disorder
       Region 8og9 A 1080-1315 order
       Region 8og9 A 1316-1325 disorder
       Region 8og9 A 1326-1390 order
       Region 8og9 A 1391-1401 disorder
 Evidence X-RAY 8oga P Reference
       Region 8oga P 1079-1079 disorder
       Region 8oga P 1080-1315 order
       Region 8oga P 1316-1326 disorder
       Region 8oga P 1327-1390 order
       Region 8oga P 1391-1393 disorder
 Evidence X-RAY 8ogb A Reference
       Region 8ogb A 1039-1079 disorder
       Region 8ogb A 1080-1315 order
       Region 8ogb A 1316-1325 disorder
       Region 8ogb A 1326-1389 order
       Region 8ogb A 1390-1401 disorder
 Evidence X-RAY 8ogc A Reference
       Region 8ogc A 1039-1079 disorder
       Region 8ogc A 1080-1315 order
       Region 8ogc A 1316-1325 disorder
       Region 8ogc A 1326-1389 order
       Region 8ogc A 1390-1401 disorder
 Evidence X-RAY 8oo5 P Reference
       Region 8oo5 P 1079-1079 disorder
       Region 8oo5 P 1080-1315 order
       Region 8oo5 P 1316-1326 disorder
       Region 8oo5 P 1327-1390 order
       Region 8oo5 P 1391-1393 disorder
 Evidence X-RAY 8ood A Reference
       Region 8ood A 1039-1079 disorder
       Region 8ood A 1080-1315 order
       Region 8ood A 1316-1325 disorder
       Region 8ood A 1326-1389 order
       Region 8ood A 1390-1401 disorder
Seq 1045-1396 Hetero tetramer : A4UDG5,IID00840Complex,P00720
 Evidence X-RAY 6zx9 B Reference
       Region 6zx9 B 1045-1045 disorder
       Region 6zx9 B 1046-1061 order
       Region 6zx9 B 1062-1066 disorder
       Region 6zx9 B 1067-1312 order
       Region 6zx9 B 1313-1326 disorder
       Region 6zx9 B 1327-1396 order
Seq 1045-1396 Hetero dimer : IID00840Complex
 Evidence X-RAY 6zue B Reference
       Region 6zue B 1045-1045 disorder
       Region 6zue B 1046-1060 order
       Region 6zue B 1061-1067 disorder
       Region 6zue B 1068-1091 order
       Region 6zue B 1092-1095 disorder
       Region 6zue B 1096-1314 order
       Region 6zue B 1315-1328 disorder
       Region 6zue B 1329-1372 order
       Region 6zue B 1373-1380 disorder
       Region 6zue B 1381-1396 order
Seq 1045-1396 Hetero tetramer : IID00840Complex,P12520
 Evidence X-RAY 5jk7 C Reference
       Region 5jk7 C 1045-1045 disorder
       Region 5jk7 C 1046-1314 order
       Region 5jk7 C 1315-1327 disorder
       Region 5jk7 C 1328-1389 order
       Region 5jk7 C 1390-1396 disorder
 Evidence X-RAY 5jk7 E Reference
       Region 5jk7 E 1045-1045 disorder
       Region 5jk7 E 1046-1314 order
       Region 5jk7 E 1315-1327 disorder
       Region 5jk7 E 1328-1389 order
       Region 5jk7 E 1390-1396 disorder
Seq 1057-1396 Hetero trimer : H6WEA4,Q7ZB17
 Evidence X-RAY 4z8l A Reference
       Region 4z8l A 1057-1072 disorder
       Region 4z8l A 1073-1314 order
       Region 4z8l A 1315-1327 disorder
       Region 4z8l A 1328-1390 order
       Region 4z8l A 1391-1396 disorder
 Evidence X-RAY 4z8l D Reference
       Region 4z8l D 1057-1072 disorder
       Region 4z8l D 1073-1314 order
       Region 4z8l D 1315-1327 disorder
       Region 4z8l D 1328-1390 order
       Region 4z8l D 1391-1396 disorder
 Evidence X-RAY 5aja A Reference
       Region 5aja A 1058-1074 disorder
       Region 5aja A 1075-1315 order
       Region 5aja A 1316-1326 disorder
       Region 5aja A 1327-1392 order
       Region 5aja A 1393-1396 disorder
Seq 1058-1396 Hetero trimer : IID90030Complex,Q9Y3Z3
 Evidence X-RAY 4cc9 A Reference
       Region 4cc9 A 1058-1072 disorder
       Region 4cc9 A 1073-1314 order
       Region 4cc9 A 1315-1327 disorder
       Region 4cc9 A 1328-1392 order
       Region 4cc9 A 1393-1396 disorder
Seqdisorder 1418-1507
 Evidence CD Reference
       Region 1418-1507 disorder
Seq 1418-1507 Hetero heptamer : IID50318Complex
 Evidence X-RAY 3wa0 G Reference
       Region 3wa0 G 1418-1478 disorder
       Region 3wa0 G 1479-1489 order
       Region 3wa0 G 1490-1507 disorder
 Evidence X-RAY 3wa0 H Reference
       Region 3wa0 H 1418-1496 disorder
       Region 3wa0 H 1497-1507 order
Seq 1447-1507 Hetero dimer : IID50318Complex
 Evidence X-RAY 4p7i D Reference
       Region 4p7i D 1447-1499 disorder
       Region 4p7i D 1500-1506 order
       Region 4p7i D 1507-1507 disorder
Seq 1447-1507 Hetero dimer : IID50318Complex
 Evidence X-RAY 4p7i C Reference
       Region 4p7i C 1447-1479 disorder
       Region 4p7i C 1480-1487 order
       Region 4p7i C 1488-1499 disorder
       Region 4p7i C 1500-1506 order
       Region 4p7i C 1507-1507 disorder
Seqdisorder 1475-1507
 Evidence X-RAY 6n45 A Reference
       Region 6n45 A 1475-1507 disorder
Seqdisorder 1475-1507
 Evidence X-RAY 6n45 B Reference
       Region 6n45 B 1475-1507 disorder
SeqProS verified 1479-1489,1497-1507 Hetero heptamer : IID50318Complex
       Region 3wa0 G 1479-1489 order
       Region 3wa0 H 1497-1507 order
       Region 1418-1507 disorder
SeqProS verified 1479-1489,1497-1507 Hetero dimer : IID50318Complex
       Region 4p7i C 1480-1487 order
       Region 4p7i C 1500-1506 order
       Region 1418-1507 disorder
SeqProS verified 1497-1507 Hetero dimer : IID50318Complex
       Region 4p7i D 1500-1506 order
       Region 1418-1507 disorder
Seqphosphorylation
    202-202 Phosphoserine
    255-255 Phosphoserine
    828-828 Phosphoserine
    888-888 Phosphothreonine
    895-895 Phosphoserine
    898-898 Phosphoserine
    979-979 Phosphoserine
    1000-1000 Phosphoserine
    1328-1328 Phosphoserine
    202-202 Phosphoserine
    255-255 Phosphoserine
    828-828 Phosphoserine
    888-888 Phosphothreonine
    895-895 Phosphoserine
    898-898 Phosphoserine
    979-979 Phosphoserine
    1000-1000 Phosphoserine
    1328-1328 Phosphoserine
Seqacetylation
    701-701 N6-acetyllysine
    701-701 N6-acetyllysine
 
Prediction
NeProc
Disorder 1-8,189-306,545-552,651-667,678-686,695-717,876-1001,1316-1321,1419-1507
Order 9-188,307-498,504-544,553-650,668-677,687-689,718-875,1002-1315,1322-1418
ProS 202-219,296-306,545-552,653-667,678-686,698-712,897-906,955-960,1419-1423,1429-1436,1456-1466,1482-1488,1495-1507
AlphaFold
Disorder 1-8,191-309,314-315,499-504,545-554,581-581,650-650,693-719,783-784,819-833,878-1000,1038-1043,1315-1327,1373-1379,1394-1507
Order 9-190,310-313,316-498,505-544,555-580,582-649,651-692,720-782,785-818,834-877,1001-1037,1044-1314,1328-1372,1380-1393
SEG 175-192 ,201-212 ,592-606 ,1394-1453 ,1458-1484
Function
Function in SwissProt
Acts both as a substrate recognition component of E3 ubiquitin-protein ligase complexes and as an atypical serine/threonine-protein kinase, playing key roles in various processes such as cell cycle, telomerase regulation and histone modification. Probable substrate-specific adapter of a DCX (DDB1-CUL4-X-box) E3 ubiquitin-protein ligase complex, named CUL4A-RBX1-DDB1-DCAF1/VPRBP complex, which mediates ubiquitination and proteasome-dependent degradation of proteins such as NF2. Involved in the turnover of methylated proteins: recognizes and binds methylated proteins via its chromo domain, leading to ubiquitination of target proteins by the RBX1-DDB1-DCAF1/VPRBP complex (PubMed:23063525). The CUL4A-RBX1-DDB1-DCAF1/VPRBP complex is also involved in B-cell development: DCAF1 is recruited by RAG1 to ubiquitinate proteins, leading to limit error-prone repair during V(D)J recombination. Also part of the EDVP complex, an E3 ligase complex that mediates ubiquitination of proteins such as TERT, leading to TERT degradation and telomerase inhibition (PubMed:23362280). Also acts as an atypical serine/threonine-protein kinase that specifically mediates phosphorylation of 'Thr-120' of histone H2A (H2AT120ph) in a nucleosomal context, thereby repressing transcription. H2AT120ph is present in the regulatory region of many tumor suppresor genes, down-regulates their transcription and is present at high level in a number of tumors (PubMed:24140421). Involved in JNK-mediated apoptosis during cell competition process via its interaction with LLGL1 and LLGL2 (PubMed:20644714). By acting on TET dioxygenses, essential for oocyte maintenance at the primordial follicle stage, hence essential for female fertility (By similarity).
(Microbial infection) In case of infection by HIV-1 virus, it is recruited by HIV-1 Vpr in order to hijack the CUL4A-RBX1-DDB1-DCAF1/VPRBP function leading to arrest the cell cycle in G2 phase, and also to protect the viral protein from proteasomal degradation by another E3 ubiquitin ligase. The HIV-1 Vpr protein hijacks the CUL4A-RBX1-DDB1-DCAF1/VPRBP complex to promote ubiquitination and degradation of proteins such as TERT and ZIP/ZGPAT.
(Microbial infection) In case of infection by HIV-2 virus, it is recruited by HIV-2 Vpx in order to hijack the CUL4A-RBX1-DDB1-DCAF1/VPRBP function leading to enhanced efficiency of macrophage infection and promotion of the replication of cognate primate lentiviruses in cells of monocyte/macrophage lineage.
Biological Process
Diagram with PDB data
DCAF1/Nf2Crystal structure of the Merlin FERM/DCAF1 complex
DCAF1/DDB1/CUL4A/RBX1Cryo-EM Structure of the DDB1-DCAF1-CUL4A-RBX1 Complex